scRNA-seq Data Tools
Tools for scRNA-seq data
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The P2M.db represents a comprehensive resource encompassing 49 cancer types and subtypes, originating from 28 primary tissues (including breast, colorectal, gastric, and pancreatic carcinomas) and metastasizing to 25 secondary sites (such as hepatic, lymph nodal, pulmonary, and cerebral tissues).
Our database integrates single-cell RNA sequencing data from 51 datasets, comprising 3,745,638 cells. Bulk transcriptomic data, systematically curated from GEO and TCGA repositories, includes 12,896 samples across 86 datasets.
The platform is equipped with 13 analytical modules designed to facilitate comparative analyses between primary and metastatic neoplasms, enabling users to explore, visualize, and download processed datasets and analytical results.
Ocular melanomasBulk: Primary 80; Metastasis 0 |
Head and Neck CancerscRNA-seq: Primary 21; Metastasis 9 Head and Neck Squamous Cell CarcinomascRNA-seq: Primary 37; Metastasis 15 Hypopharygeal Squamous Cell CarcinomascRNA-seq: Primary 5; Metastasis 5 Salivary Adenoid Cystic CarcinomascRNA-seq: Primary 1; Metastasis 3 |
Clear Cell Renal CarcinomaBulk: Primary 8; Metastasis 4 Clear Cell Renal Cell CarcinomaBulk: Primary 36; Metastasis 53 Kidney ChromophobeBulk: Primary 66; Metastasis 0 Kidney Clear Cell CarcinomaBulk: Primary 542; Metastasis 0 Kidney Papillary Cell CarcinomaBulk: Primary 291; Metastasis 0 Renal Cell CarcinomaBulk: Primary 15; Metastasis 16 |
Bile Duct CancerBulk: Primary 35; Metastasis 0 Liver CancerBulk: Primary 371; Metastasis 0 |
Gastrointestinal Stromal TumorscRNA-seq: Primary 4; Metastasis 5 Stomach CancerBulk: Primary 412; Metastasis 0 |
High-grade Serous Ovarian CancerscRNA-seq: Primary 6; Metastasis 11 |
Uterine Serous CancerBulk: Primary 27; Metastasis 27 |
Esophageal CancerBulk: Primary 184; Metastasis 1 Esophageal Squamous Cell CarcinomascRNA-seq: Primary 4; Metastasis 3 |
Lung CancerBulk: Primary 13; Metastasis 15 Lung AdenocarcinomaBulk: Primary 539; Metastasis 0 Lung Squamous Cell CarcinomaBulk: Primary 502; Metastasis 0 Non-small Cell Lung CancerscRNA-seq: Primary 11; Metastasis 31 |
Pancreatic AdenocarcinomaBulk: Primary 363; Metastasis 132 Pancreatic Ductal AdenocarcinomascRNA-seq: Primary 26; Metastasis 11 Pancreatic Neuroendocrine TumorscRNA-seq: Primary 34; Metastasis 5 |
Midgut Carcinoid tumorBulk: Primary 18; Metastasis 24 Rectal CancerBulk: Primary 166; Metastasis 0 Small Intestine Neuroendocrine TumorBulk: Primary 3; Metastasis 3 |
Testicular CancerBulk: Primary 156; Metastasis 0 Testicular TumorscRNA-seq: Primary 1; Metastasis 2 |
MelanomaBulk: Primary 149; Metastasis 381 Merkel Cell CarcinomaBulk: Primary 9; Metastasis 12 |
Bladder CancerBulk: Primary 412; Metastasis 0 |
Tools for scRNA-seq data
Explore →Tools for Bulk data
Explore →Include Bulk data and scRNA-seq data
Explore →Download analysis results of datasets
Explore →Email: chaohanxu@hrbmu.edu.cn
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