Primary and metastatic cancer transcriptomic data collection

P2M.db: a harmonized collection of single-cell and bulk transcriptomic datasets from primary and metastatic cancers

The P2M.db represents a comprehensive resource encompassing 49 cancer types and subtypes, originating from 28 primary tissues (including breast, colorectal, gastric, and pancreatic carcinomas) and metastasizing to 25 secondary sites (such as hepatic, lymph nodal, pulmonary, and cerebral tissues).

Our database integrates single-cell RNA sequencing data from 51 datasets, comprising 3,745,638 cells. Bulk transcriptomic data, systematically curated from GEO and TCGA repositories, includes 12,896 samples across 86 datasets.

The platform is equipped with 13 analytical modules designed to facilitate comparative analyses between primary and metastatic neoplasms, enabling users to explore, visualize, and download processed datasets and analytical results.

Human body tissue overview
Eyes
Breast
Kidney
Liver
Stomach
Ovary
Uterus
Thyroid and Esophagus
Lung
Pancreas
Intestine
Bone
Testicle
Skin
Urology

Tools

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Looking For Information Of Interest Here

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You can input cancer type, cancer primary site, cancer metastasis site, dataset name, data type, experimental platform, etc. here, for example: GSE197771, GPL570
You can only search for one key information at a time
Contact Us

Email: chaohanxu@hrbmu.edu.cn
Phone & Fax: +86 18645000650
Address: 194 Xuefu Road, Harbin 150081, CHINA

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